Miyakogusa Predicted Gene

Lj0g3v0165929.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7JHG5_MEDTR 251 52.2 58.9 (tr|G7JHG5) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g082910 PE=4 SV=1

TAIR_pep AT1G13920.1 111 50.9 72.6 | Symbols: | Remorin family protein | chr1:4758188-4759754 FORWARD LENGTH=345

Medicago Medtr4g082910.1 251 52.2 58.9 | carboxy-terminal region remorin | HC | chr4:32232844-32230281 | 20130731

Soybean Glyma20g03300.1 188 49.8 60.3

LJGI --No_Hits--

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0165929.1 length: 317 aa.

IPR005516 Remorin, C-terminal

method AccNumber shortName E-value location

HMMPfam PF03763 Remorin_C 7.9e-25 207-314

no_ID

Coil coil coiled-coil NA 220-241

Seg seg seg NA 13-22
139-150
179-185

Wolf-PSORT

Lj0g3v0165929.1 nucl 9, cyto 5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0165929.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7JHG5_MEDTR	251	52.2	58.9	(tr\|G7JHG5) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g082910 PE=4 SV=1
TAIR_pep	AT1G13920.1	111	50.9	72.6	\| Symbols: \| Remorin family protein \| chr1:4758188-4759754 FORWARD LENGTH=345
Medicago	Medtr4g082910.1	251	52.2	58.9	\| carboxy-terminal region remorin \| HC \| chr4:32232844-32230281 \| 20130731
Soybean	Glyma20g03300.1	188	49.8	60.3
LJGI	--No_Hits--

IPR005516	Remorin, C-terminal
Lj0g3v0165929.1				length: 317 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF03763	Remorin_C	7.9e-25	207-314
no_ID
Coil	coil	coiled-coil	NA	220-241
Seg	seg	seg	NA	13-22 139-150 179-185