Miyakogusa Predicted Gene

Lj0g3v0165409.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IYB6_MEDTR 602 82.5 87.1 (tr|G7IYB6) Protein TRIGALACTOSYLDIACYLGLYCEROL OS=Medicago truncatula GN=MTR_3g005100 PE=4 SV=1
TAIR_pep AT1G19800.1 465 65.7 77.3 | Symbols: TGD1 | trigalactosyldiacylglycerol 1 | chr1:6846812-6847954 FORWARD LENGTH=350
Medicago Medtr3g005100.1 602 82.5 87.1 | ABC transporter | HC | chr3:61357-65017 | 20130731
Soybean Glyma20g35060.1 580 79.2 84.6  
LJGI gnl|LJGI|FS353311 1168 99.8 99.8 homologue to UniRef100_A7Q9L4 Cluster: Chromosome chr5 scaffold_67, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_67, whole genome shotgun sequence - Vitis vinifera (Grape), partial (59%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0165409.1 length: 367 aa.
IPR003453 Permease domain
method AccNumber shortName E-value location
HMMPfam PF02405 Permease 7.9e-71 141-355
HMMTigr TIGR00056 TIGR00056: 1.4e-76 121-358
no_ID  
HMMPanther PTHR30188 ABC 1e-106 74-361
Seg seg seg NA 254-264
Putative transmembrane regions
  From To
TM segments
SOSUI		 114 135
151 173
192 214
242 264
299 321
334 356
Wolf-PSORT
Lj0g3v0165409.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0165409.1