Miyakogusa Predicted Gene
- Lj0g3v0165139.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KJF5_SOYBN |
163 |
80.2 |
82.2 |
(tr|I1KJF5) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G02145.3 |
131 |
66.0 |
74.0 |
| Symbols: ALG12, EBS4 | homolog of asparagine-linked glycosylation 12 | chr1:404627-408485 FORWARD LENGTH=497 |
| Medicago |
Medtr8g007345.1 |
155 |
74.3 |
81.2 |
| Alg9-like mannosyltransferase family protein | HC | chr8:1470357-1479731 | 20130731 |
| Soybean |
Glyma07g13150.1 |
163 |
80.2 |
82.2 |
|
| LJGI |
gnl|LJGI|FS325042 |
329 |
99.4 |
99.4 |
similar to UniRef100_A8MR93 Cluster: Uncharacterized protein At1g02145.3; n=1; Arabidopsis thaliana|Rep: Uncharacterized protein At1g02145.3 - Arabidopsis thaliana (Mouse-ear cress), partial (45%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0165139.1 |
length: 125 aa. |
| IPR005599 |
GPI mannosyltransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006506 |
GPI anchor biosynthetic process |
|
|
| Molecular Function |
GO:0016757 |
transferase activity, transferring glycosyl groups |
|
|
| Cellular Component |
GO:0031227 |
intrinsic to endoplasmic reticulum membrane |
|
|
| HMMPanther |
PTHR22760 |
GLYCOSYLTRANSFERASE |
1e-11 |
1-118 |
| HMMPfam |
PF03901 |
Glyco_transf_22 |
1.9e-06 |
5-122 |
| no_ID |
|
| HMMPanther |
PTHR22760:SF0 |
SUBFAMILY |
1e-11 |
1-118 |
| Seg |
seg |
seg |
NA |
102-115 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
23 |
45 |
| 53 |
75 |
| 89 |
111 |
- Wolf-PSORT
Lj0g3v0165139.1 plas 6, vacu 3, E.R. 3, nucl_plas 3, E.R._vacu 3, cysk_plas 3, mito_plas 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0165139.1 |
|