Miyakogusa Predicted Gene

Lj0g3v0165079.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7IJ02_MEDTR 724 81.7 88.6 (tr|G7IJ02) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g060720 PE=4 SV=1

TAIR_pep AT5G13020.1 423 56.5 68.3 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein | chr5:4129691-4132089 REVERSE LENGTH=397

Medicago Medtr2g060720.1 724 81.7 88.6 | emsy amine-terminus (ENT)/plant tudor-like domain protein | HC | chr2:25751114-25756589 | 20130731

Soybean Glyma09g00250.3 689 82.0 86.4

LJGI gnl|LJGI|TC62928 1104 100.0 100.0 similar to UniRef100_A7QRA7 Cluster: Chromosome chr13 scaffold_149, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_149, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0165079.1 length: 434 aa.

IPR005491 EMSY N-terminal

method AccNumber shortName E-value location

HMMPfam PF03735 ENT 1.2e-30 51-122

ProfileScan PS51138 ENT 23.785 51-138

no_ID

Coil coil coiled-coil NA 85-106
389-410

HMMPanther PTHR31163 FAMILY 2.6e-151 2-421

Seg seg seg NA 190-201

superfamily SSF63748 Tudor/PWWP/MBT 7e-09 241-282

Wolf-PSORT

Lj0g3v0165079.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0165079.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7IJ02_MEDTR	724	81.7	88.6	(tr\|G7IJ02) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g060720 PE=4 SV=1
TAIR_pep	AT5G13020.1	423	56.5	68.3	\| Symbols: \| Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein \| chr5:4129691-4132089 REVERSE LENGTH=397
Medicago	Medtr2g060720.1	724	81.7	88.6	\| emsy amine-terminus (ENT)/plant tudor-like domain protein \| HC \| chr2:25751114-25756589 \| 20130731
Soybean	Glyma09g00250.3	689	82.0	86.4
LJGI	gnl\|LJGI\|TC62928	1104	100.0	100.0	similar to UniRef100_A7QRA7 Cluster: Chromosome chr13 scaffold_149, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr13 scaffold_149, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)

IPR005491	EMSY N-terminal
Lj0g3v0165079.1				length: 434 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF03735	ENT	1.2e-30	51-122
ProfileScan	PS51138	ENT	23.785	51-138
no_ID
Coil	coil	coiled-coil	NA	85-106 389-410
HMMPanther	PTHR31163	FAMILY	2.6e-151	2-421
Seg	seg	seg	NA	190-201
superfamily	SSF63748	Tudor/PWWP/MBT	7e-09	241-282