Miyakogusa Predicted Gene
- Lj0g3v0164369.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7K5N2_SOYBN |
100 |
67.2 |
85.9 |
(tr|K7K5N2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G19184.1 |
55.8 |
64.9 |
78.4 |
| Symbols: | AP2/B3-like transcriptional factor family protein | chr3:6637555-6639035 FORWARD LENGTH=277 |
| Medicago |
Medtr3g101520.1 |
56.2 |
62.2 |
81.1 |
| B3 domain transcription factor | HC | chr3:46725903-46730052 | 20130731 |
| Soybean |
Glyma01g45640.1 |
97.1 |
74.1 |
89.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0164369.1 |
length: 69 aa. |
| IPR003340 |
B3 DNA binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| ProfileScan |
PS50863 |
B3 |
9.939 |
1-40 |
| IPR015300 |
DNA-binding pseudobarrel domain |
| Gene3D |
G3DSA:2.40.330.10 |
no description |
1.3e-06 |
2-39 |
| superfamily |
SSF101936 |
DNA-binding |
1.4e-07 |
1-41 |
| no_ID |
|
| HMMPanther |
PTHR31391 |
FAMILY |
7.2e-13 |
2-46 |
- Wolf-PSORT
Lj0g3v0164369.1 chlo 4, cyto 3, chlo_mito 3, mito 2, extr 2, cyto_nucl 2, cyto_pero 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0164369.1 |
|