Miyakogusa Predicted Gene

Lj0g3v0164339.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J5H4_SOYBN 1099 72.5 81.2 (tr|I1J5H4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G27180.1 615 45.3 60.8 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr1:9439859-9445818 FORWARD LENGTH=1556
Medicago Medtr8g062140.1 709 50.9 67.5 | disease resistance protein (TIR-NBS-LRR class), putative | HC | chr8:25961181-25954714 | 20130731
Soybean Glyma01g04590.1 1085 72.8 81.8  
LJGI gnl|LJGI|BP043776 971 99.8 99.8 weakly similar to UniRef100_Q5CWL8 Cluster: Ubiquitin carboxyl-terminal hydrolase; n=2; Cryptosporidium parvum|Rep: Ubiquitin carboxyl-terminal hydrolase - Cryptosporidium parvum Iowa II, partial (3%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0164339.1 length: 839 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.16 351-370
510-528
ProfileScan PS51450 LRR 4.686 91-113
138-161
186-207
209-230
232-254
280-301
350-372
374-395
510-531
577-599
554-576
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 34 184-207
230-254
278-301
372-395
419-441
508-531
no_ID  
Gene3D G3DSA:3.80.10.10 no description 2.3e-20 14-160
161-256
257-454
478-609
HMMPanther PTHR23155 LEUCINE-RICH 1.1e-63 24-606
HMMPanther PTHR23155:SF37 LEUCINE-RICH 1.1e-63 24-606
HMMPfam PF13504 LRR_7 7 162-178
232-248
Seg seg seg NA 346-357
548-558
759-774
superfamily SSF52058 L 4.1e-44 338-686
16-335
Putative transmembrane regions
  From To
TM segments
SOSUI		 816 838
Wolf-PSORT
Lj0g3v0164339.1	cyto 7, nucl 2, E.R. 2, chlo 1, mito 1, vacu 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0164339.1