Miyakogusa Predicted Gene
- Lj0g3v0164069.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JDE3_SOYBN |
587 |
75.0 |
85.4 |
(tr|I1JDE3) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G18740.1 |
454 |
58.6 |
74.9 |
| Symbols: | Protein of unknown function (DUF793) | chr1:6464125-6465273 FORWARD LENGTH=382 |
| Medicago |
Medtr6g037000.1 |
543 |
69.5 |
82.4 |
| plant/F1M20-13 protein | HC | chr6:13008428-13009635 | 20130731 |
| Soybean |
Glyma02g09000.1 |
590 |
74.9 |
85.3 |
|
| LJGI |
gnl|LJGI|FS320394 |
866 |
100.0 |
100.0 |
similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_59, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0164069.1 |
length: 386 aa. |
| IPR008511 |
Protein BYPASS-related |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05633 |
DUF793 |
4.3e-162 |
7-383 |
| no_ID |
|
| HMMPanther |
PTHR31509 |
FAMILY |
6.8e-105 |
20-386 |
| HMMPanther |
PTHR31509:SF0 |
SUBFAMILY |
6.8e-105 |
20-386 |
| Seg |
seg |
seg |
NA |
177-191 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
239 |
261 |
- Wolf-PSORT
Lj0g3v0164069.1 chlo 6, nucl 3.5, cysk_nucl 2.5, mito 2, extr 1, vacu 1, cyto_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0164069.1 |
|