Miyakogusa Predicted Gene

Lj0g3v0163869.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I3SKM7_LOTJA 493 82.1 82.1 (tr|I3SKM7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G42860.1 263 47.4 59.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:17183339-17184857 REVERSE LENGTH=320
Medicago Medtr6g081930.1 379 67.4 73.0 | late embryogenesis abundant protein | HC | chr6:30580513-30584032 | 20130731
Soybean Glyma07g11160.1 418 71.8 76.1  
LJGI gnl|LJGI|TC59962 1754 99.1 99.1 weakly similar to UniRef100_Q84VY4 Cluster: At5g42860; n=1; Arabidopsis thaliana|Rep: At5g42860 - Arabidopsis thaliana (Mouse-ear cress), partial (71%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0163869.1 length: 302 aa.
IPR004864 Late embryogenesis abundant protein, LEA-14
method AccNumber shortName E-value location
HMMPfam PF03168 LEA_2 2e-06 177-281
no_ID  
Seg seg seg NA 13-25
54-73
114-132
Putative transmembrane regions
  From To
TM segments
SOSUI
112 134
Wolf-PSORT
Lj0g3v0163869.1	chlo 4, nucl 2.5, chlo_mito 2.5, cyto 2, plas 2, cysk_nucl 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0163869.1 Not targeted -40.533 -0.278 -4.232 54.59% -36.024