Miyakogusa Predicted Gene

Lj0g3v0163479.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7N4P0_SOYBN 1265 82.2 86.5 (tr|K7N4P0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G23150.1 845 56.4 70.3 | Symbols: ETR2 | Signal transduction histidine kinase, hybrid-type, ethylene sensor | chr3:8255156-8257560 FORWARD LENGTH=773
Medicago Medtr1g073840.1 1239 79.9 85.9 | ethylene receptor ETR2 | HC | chr1:32787556-32791850 | 20130731
Soybean Glyma20g34420.2 1265 82.2 86.5  
LJGI gnl|LJGI|DC595473 747 98.5 98.5 similar to UniRef100_A2T3V0 Cluster: Ethylene receptor 2; n=1; Malus x domestica|Rep: Ethylene receptor 2 - Malus domestica (Apple) (Malus sylvestris), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0163479.1 length: 758 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 phosphorelay response regulator activity    
Biological Process GO:0000160 phosphorelay signal transduction system    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 4.5e-17 634-738
HMMSmart SM00448 cheY-homologous 1.7e-19 632-751
ProfileScan PS50110 RESPONSE_REGULATORY 22.452 633-751
IPR003018 GAF domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF01590 GAF 1e-07 182-328
HMMSmart SM00065 Domain 0.00055 182-338
IPR003661 Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
Molecular Function GO:0000155 phosphorelay sensor kinase activity    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMPfam PF00512 HisKA 1.8e-06 365-427
HMMSmart SM00388 His 1.8e-07 364-429
IPR009082 Signal transduction histidine kinase, homodimeric domain
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
superfamily SSF47384 Homodimeric 1.4e-09 346-431
IPR011006 CheY-like superfamily
superfamily SSF52172 CheY-like 1.4e-26 630-751
IPR014525 Signal transduction histidine kinase, hybrid-type, ethylene sensor
Molecular Function GO:0000155 phosphorelay sensor kinase activity    
Molecular Function GO:0004673 protein histidine kinase activity    
Cellular Component GO:0005789 endoplasmic reticulum membrane    
Biological Process GO:0009873 ethylene mediated signaling pathway    
HMMPIR PIRSF026389 Hybrid 0 1-758
no_ID  
Coil coil coiled-coil NA 334-365
Gene3D G3DSA:3.40.50.2300 no description 1.6e-26 629-752
HMMPanther PTHR24423 TWO 5.9e-35 145-758
HMMPanther PTHR24423:SF360HYBRID SIGNAL 5.9e-35 145-758
Seg seg seg NA 124-137
253-271
541-555
superfamily SSF55781 GAF 7.9e-09 182-342
Putative transmembrane regions
  From To
TM segments
SOSUI
2 23
49 71
76 98
113 135
252 274
284 305
Wolf-PSORT
Lj0g3v0163479.1	plas 12, vacu 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0163479.1