Miyakogusa Predicted Gene

Lj0g3v0162339.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I7Z2_MEDTR 483 77.4 87.8 (tr|G7I7Z2) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_1g056160 PE=4 SV=1
TAIR_pep AT3G04130.2 326 56.0 75.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:1084136-1085662 FORWARD LENGTH=508
Medicago Medtr1g056160.1 481 77.4 87.8 | PPR containing plant protein | HC | chr1:24577487-24578941 | 20130731
Soybean Glyma16g06280.1 344 82.6 91.8  
LJGI gnl|LJGI|FS335330 1114 99.8 99.8 weakly similar to UniRef100_A7QBT0 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0162339.1 length: 306 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 3.3e-15 175-223
244-293
HMMTigr TIGR00756 PPR: 8.7e-05 109-138
212-244
247-281
282-305
ProfileScan PS51375 PPR 9.251 106-140
176-206
141-175
210-244
245-279
280-306
no_ID  
HMMPanther PTHR24015 FAMILY 6.8e-68 71-306
HMMPanther PTHR24015:SF0 SUBFAMILY 6.8e-68 71-306
Wolf-PSORT
Lj0g3v0162339.1	mito 8, chlo_mito 6.83333, cyto_mito 4.83333, chlo 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0162339.1