Miyakogusa Predicted Gene

Lj0g3v0162139.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LDA0_SOYBN 1702 80.1 88.2 (tr|K7LDA0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G18290.1 1216 59.5 72.3 | Symbols: EMB2454, BTS | zinc finger protein-related | chr3:6274308-6280174 FORWARD LENGTH=1254
Medicago Medtr6g083900.1 1275 62.3 73.3 | CHY zinc finger protein | HC | chr6:31304656-31314509 | 20130731
Soybean Glyma09g18770.1 1665 79.0 86.8  
LJGI gnl|LJGI|TC70974 1592 100.0 100.0 similar to UniRef100_A7P3B2 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0162139.3 length: 1028 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1e-07 923-967
HMMSmart SM00184 Ring 2.8e-05 924-965
ProfileScan PS50089 ZF_RING_2 10.984 924-966
IPR004039 Rubredoxin-type fold
Gene3D G3DSA:2.20.28.10 no description 2.4e-17 994-1028
IPR008913 Zinc finger, CHY-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF05495 zf-CHY 3.2e-16 795-872
ProfileScan PS51266 ZF_CHY 26.217 788-857
IPR012312 Haemerythrin/HHE cation-binding motif
HMMPfam PF01814 Hemerythrin 1.8e-07 107-237
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.9e-08 921-971
IPR017921 Zinc finger, CTCHY-type
ProfileScan PS51270 ZF_CTCHY 28.585 860-923
no_ID  
Gene3D G3DSA:1.20.120.520 no description 1.3e-33 104-292
576-662
HMMPanther PTHR21319 RING 3.2e-253 1-1028
superfamily SSF57850 RING/U-box 1.7e-11 917-987
Wolf-PSORT
Lj0g3v0162139.3	nucl 11, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0162139.3