Miyakogusa Predicted Gene

Lj0g3v0162109.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JZH2_MEDTR 453 67.6 76.0 (tr|G7JZH2) Leucine-rich repeat receptor-like protein kinase OS=Medicago truncatula GN=MTR_5g055470 PE=4 SV=1
TAIR_pep AT1G68400.1 373 57.7 68.9 | Symbols: | leucine-rich repeat transmembrane protein kinase family protein | chr1:25646401-25648916 REVERSE LENGTH=670
Medicago Medtr5g055470.1 453 67.6 76.0 | LRR receptor-like kinase | HC | chr5:22836537-22840458 | 20130731
Soybean Glyma19g10720.1 405 64.3 73.4  
LJGI gnl|LJGI|TC71828 480 100.0 100.0 similar to UniRef100_A7P3B8 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0162109.1 length: 409 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
ProfileScan PS50011 PROTEIN_KINASE_DOM 11.962 236-409
IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF07714 Pkinase_Tyr 2.2e-10 240-341
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.12 25-41
70-92
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 2.5e-22 204-345
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 4.5e-06 214-249
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 242-264
no_ID  
Gene3D G3DSA:3.30.200.20 no description 5.2e-18 250-312
Gene3D G3DSA:3.80.10.10 no description 1.3e-22 4-92
HMMPanther PTHR24420 FAMILY 2e-148 1-345
HMMPanther PTHR24420:SF423SUBFAMILY NOT 2e-148 1-345
Seg seg seg NA 155-165
192-206
superfamily SSF52058 L 2.2e-23 1-112
Putative transmembrane regions
  From To
TM segments
SOSUI		 144 166
Wolf-PSORT
Lj0g3v0162109.1	chlo 5, vacu 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0162109.1