Miyakogusa Predicted Gene
- Lj0g3v0161589.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3ST46_LOTJA |
64.3 |
61.4 |
68.4 |
(tr|I3ST46) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G15710.1 |
60.5 |
53.7 |
66.7 |
| Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr3:5323564-5324785 REVERSE LENGTH=180 |
| Medicago |
Medtr2g103570.1 |
62.8 |
59.6 |
68.4 |
| microsomal signal peptidase subunit | HC | chr2:44601268-44597771 | 20130731 |
| Soybean |
Glyma17g06330.1 |
63.2 |
59.6 |
68.4 |
|
| LJGI |
gnl|LJGI|TC59248 |
184 |
91.5 |
91.5 |
homologue to UniRef100_A7QIR3 Cluster: Chromosome chr9 scaffold_104, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_104, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0161589.1 |
length: 61 aa. |
| IPR001733 |
Peptidase S26B, eukaryotic signal peptidase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006465 |
signal peptide processing |
|
|
| Molecular Function |
GO:0008233 |
peptidase activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR10806 |
SIGNAL |
3.5e-23 |
8-54 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
36-49 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
11 |
33 |
- Wolf-PSORT
Lj0g3v0161589.1 extr 8, cyto 2, vacu 2, chlo 1, mito 1, cyto_nucl 1, chlo_mito 1, E.R._vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0161589.1 |
|