Miyakogusa Predicted Gene

Lj0g3v0159849.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MXR8_SOYBN 841 68.3 77.8 (tr|K7MXR8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G15010.1 608 59.0 73.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:4857241-4858959 FORWARD LENGTH=572
Medicago Medtr7g085100.1 817 77.5 85.9 | PPR containing plant-like protein | HC | chr7:32903829-32906178 | 20130731
Soybean Glyma16g04780.1 804 77.6 87.6  
LJGI gnl|LJGI|CB826792 961 100.0 100.0 similar to UniRef100_A7PSQ6 Cluster: Chromosome chr6 scaffold_28, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_28, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0159849.1 length: 593 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00019 176-203
353-382
HMMPfam PF13041 PPR_2 2.6e-07 384-429
455-498
HMMPfam PF13812 PPR_3 0.00028 282-313
316-349
HMMTigr TIGR00756 PPR: 1e-05 282-315
317-350
353-386
387-420
455-487
490-521
ProfileScan PS51375 PPR 11.016 172-206
210-244
315-349
279-314
350-384
385-419
452-486
424-451
487-521
no_ID  
HMMPanther PTHR24015 FAMILY 2.5e-99 23-521
HMMPanther PTHR24015:SF0 SUBFAMILY 2.5e-99 23-521
Seg seg seg NA 53-64
73-95
132-148
Wolf-PSORT
Lj0g3v0159849.1	mito 8.5, chlo 5, cyto_mito 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0159849.1