Miyakogusa Predicted Gene

Lj0g3v0158509.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KUN2_SOYBN 707 83.3 89.4 (tr|K7KUN2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G21470.1 433 52.6 71.0 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr3:7563503-7565074 FORWARD LENGTH=523
Medicago Medtr3g089880.1 676 76.1 85.0 | pentatricopeptide (PPR) repeat protein | HC | chr3:40854327-40856914 | 20130731
Soybean Glyma06g12750.1 698 84.0 89.7  
LJGI gnl|LJGI|TC71210 466 99.2 99.2 weakly similar to UniRef100_A7NSL4 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0158509.1 length: 427 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0012 38-62
71-101
103-127
306-330
HMMPfam PF12854 PPR_1 2.1e-09 3-33
HMMPfam PF13041 PPR_2 2.4e-10 134-178
232-279
HMMTigr TIGR00756 PPR: 0.0014 7-32
38-62
71-101
103-128
134-167
235-268
306-329
ProfileScan PS51375 PPR 5.196 5-35
69-103
36-66
131-165
104-130
166-200
232-266
201-231
267-301
302-332
334-368
no_ID  
HMMPanther PTHR24015 FAMILY 5.7e-169 3-410
HMMPanther PTHR24015:SF136SUBFAMILY NOT 5.7e-169 3-410
Seg seg seg NA 408-420
Wolf-PSORT
Lj0g3v0158509.1	chlo 5, cyto 5, extr 2, nucl 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0158509.1