Miyakogusa Predicted Gene

Lj0g3v0158259.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JUE6_SOYBN 171 58.4 60.2 (tr|I1JUE6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G15680.1 144 48.5 53.3 | Symbols: | Ran BP2/NZF zinc finger-like superfamily protein | chr3:5315437-5316048 FORWARD LENGTH=164
Medicago Medtr3g107610.1 169 54.0 56.8 | zinc finger (Ran-binding) family protein | HC | chr3:49625913-49624495 | 20130731
Soybean Glyma04g07270.1 171 58.4 60.2  
LJGI gnl|LJGI|BP048276 361 98.9 98.9 similar to UniRef100_A7P7R9 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0158259.1 length: 169 aa.
IPR001876 Zinc finger, RanBP2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1060.10 no description 3.1e-13 3-31
67-102
127-162
HMMPfam PF00641 zf-RanBP 5.7e-09 3-29
71-102
131-160
HMMSmart SM00547 Zinc 0.00029 5-29
73-99
133-159
PatternScan PS01358 ZF_RANBP2_1 NA 7-26
75-96
135-156
ProfileScan PS50199 ZF_RANBP2_2 10.365 3-32
71-102
131-162
no_ID  
HMMPanther PTHR23111 ZINC 1e-42 1-161
Seg seg seg NA 30-67
102-125
superfamily SSF90209 Ran 7.7e-07 121-165
61-105
1-35
Wolf-PSORT
Lj0g3v0158259.1	nucl 5, cyto 4, mito 3, extr 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0158259.1