| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7IBH2_MEDTR | 239 | 52.6 | 66.7 | (tr|G7IBH2) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_1g038860 PE=4 SV=1 |
| TAIR_pep | AT2G35030.1 | 173 | 53.3 | 70.9 | | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:14761080-14762963 REVERSE LENGTH=627 |
| Medicago | Medtr1g038860.1 | 239 | 52.6 | 66.7 | | PPR containing plant-like protein | LC | chr1:14313044-14316621 | 20130731 |
| Soybean | Glyma09g41980.1 | 228 | 58.4 | 69.8 | |
| LJGI | --No_Hits-- |
| Lj0g3v0156319.1 | length: 245 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 2.3e-09 | 78-104 109-130 139-167 170-197 |
| HMMPfam | PF12854 | PPR_1 | 2.3e-06 | 48-71 |
| HMMPfam | PF13041 | PPR_2 | 1.3e-08 | 201-239 |
| HMMTigr | TIGR00756 | PPR: | 0.0018 | 47-75 77-105 108-130 140-167 170-196 203-221 |
| ProfileScan | PS51375 | PPR | 7.563 | 74-108 43-73 137-171 201-235 172-198 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 1.1e-09 | 54-232 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 6.8e-62 | 47-245 |
Lj0g3v0156319.1 chlo 11, mito 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0156319.1 |