Miyakogusa Predicted Gene

Lj0g3v0154809.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LJM3_SOYBN 564 76.5 81.5 (tr|K7LJM3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G05210.1 439 59.9 70.3 | Symbols: ERCC1, UVR7 | nucleotide repair protein, putative | chr3:1479591-1481823 FORWARD LENGTH=410
Medicago Medtr1g082570.1 544 72.0 77.5 | DNA excision repair protein ERCC-1 | HC | chr1:36743010-36747217 | 20130731
Soybean Glyma10g29730.1 558 75.5 80.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0154809.1 length: 398 aa.
IPR004579 DNA repair protein rad10
method AccNumber shortName E-value location
Molecular Function GO:0003684 damaged DNA binding    
Molecular Function GO:0004519 endonuclease activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006281 DNA repair    
BlastProDom PD013585 Q9FWD8_ORYSA_Q9FWD8; 2e-55 109-233
HMMPfam PF03834 Rad10 4.8e-27 110-175
HMMTigr TIGR00597 rad10: 1.4e-41 109-220
IPR010994 RuvA domain 2-like
superfamily SSF47781 RuvA 3.6e-17 229-306
IPR011335 Restriction endonuclease type II-like
superfamily SSF52980 Restriction 1.6e-48 109-237
no_ID  
Gene3D G3DSA:1.10.150.20 no description 2.4e-09 248-301
HMMPanther PTHR12749 EXCISION 2.3e-114 1-371
HMMPanther PTHR12749:SF0 SUBFAMILY 2.3e-114 1-371
Seg seg seg NA 63-107
178-189
379-398
Wolf-PSORT
Lj0g3v0154809.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0154809.1