Miyakogusa Predicted Gene
- Lj0g3v0153749.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5XI94_PRUPE |
152 |
49.7 |
69.0 |
(tr|M5XI94) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022336mg PE=4 SV=1 |
| TAIR_pep |
AT5G17680.1 |
107 |
39.6 |
58.3 |
| Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294 |
| Medicago |
Medtr7g088940.1 |
150 |
52.6 |
67.1 |
| disease resistance protein (TIR-NBS-LRR class) | LC | chr7:34721476-34719572 | 20130731 |
| Soybean |
Glyma03g06840.1 |
135 |
53.4 |
70.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0153749.1 |
length: 165 aa. |
| IPR000157 |
Toll/interleukin-1 receptor homology (TIR) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Biological Process |
GO:0007165 |
signal transduction |
|
|
| HMMPfam |
PF01582 |
TIR |
2e-28 |
17-151 |
| HMMSmart |
SM00255 |
Toll |
3.9e-31 |
14-156 |
| ProfileScan |
PS50104 |
TIR |
23.634 |
13-156 |
| superfamily |
SSF52200 |
Toll/Interleukin |
1.3e-35 |
3-159 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.10140 |
no description |
1.7e-19 |
12-131 |
| HMMPanther |
PTHR11017 |
LEUCINE-RICH |
1.3e-30 |
1-156 |
| HMMPanther |
PTHR11017:SF130DISEASE |
RESISTANCE |
1.3e-30 |
1-156 |
| Seg |
seg |
seg |
NA |
48-52 |
- Wolf-PSORT
Lj0g3v0153749.1 chlo 10, nucl 2, cyto 1, mito 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0153749.1 |
|