Miyakogusa Predicted Gene
- Lj0g3v0151579.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KTN3_SOYBN |
212 |
80.8 |
90.0 |
(tr|K7KTN3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G31160.1 |
147 |
55.6 |
75.8 |
| Symbols: DCAF1 | DDB1-CUL4 associated factor 1 | chr4:15145936-15152939 FORWARD LENGTH=1883 |
| Medicago |
Medtr3g108470.1 |
198 |
75.8 |
87.5 |
| DDB1- and CUL4-associated factor-like protein | HC | chr3:50133071-50123613 | 20130731 |
| Soybean |
Glyma06g07880.1 |
211 |
80.8 |
90.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0151579.1 |
length: 158 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR13129 |
VPRBP |
2.8e-16 |
17-152 |
| HMMPanther |
PTHR13129:SF4 |
SUBFAMILY |
2.8e-16 |
17-152 |
| Seg |
seg |
seg |
NA |
2-33 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
114 |
136 |
- Wolf-PSORT
Lj0g3v0151579.1 cysk 9, nucl 2, cyto 2, cyto_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0151579.1 |
|