Miyakogusa Predicted Gene
- Lj0g3v0151219.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B7FLF9_MEDTR |
226 |
65.1 |
72.9 |
(tr|B7FLF9) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT3G02440.1 |
166 |
78.4 |
87.5 |
| Symbols: TBL20 | TRICHOME BIREFRINGENCE-LIKE 20 | chr3:500804-502229 REVERSE LENGTH=373 |
| Medicago |
Medtr6g016880.1 |
230 |
64.5 |
75.9 |
| Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein | HC | chr6:6558474-6553789 | 20130731 |
| Soybean |
Glyma18g51480.1 |
216 |
63.5 |
72.9 |
|
| LJGI |
gnl|LJGI|TC77375 |
214 |
85.2 |
85.2 |
similar to UniRef100_A7PAJ7 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0151219.1 |
length: 166 aa. |
| IPR025846 |
PMR5 N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14416 |
PMR5N |
2.1e-23 |
77-130 |
| IPR026057 |
PC-Esterase |
| HMMPfam |
PF13839 |
PC-Esterase |
4.2e-10 |
131-166 |
| no_ID |
|
| HMMPanther |
PTHR32285 |
FAMILY |
1.1e-57 |
78-166 |
| HMMPanther |
PTHR32285:SF0 |
SUBFAMILY |
1.1e-57 |
78-166 |
| Seg |
seg |
seg |
NA |
24-33 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
19 |
41 |
- Wolf-PSORT
Lj0g3v0151219.1 cyto 7, nucl 2, extr 2, chlo 1, mito 1, E.R. 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0151219.1 |
|