Miyakogusa Predicted Gene

Lj0g3v0150479.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL B9I5G3_POPTR 217 74.8 83.2 (tr|B9I5G3) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571049 PE=4 SV=1
TAIR_pep AT2G30580.1 178 64.8 77.6 | Symbols: DRIP2 | DREB2A-interacting protein 2 | chr2:13026444-13030363 FORWARD LENGTH=420
Medicago Medtr7g115240.1 208 74.0 83.2 | E3 ubiquitin protein ligase DRIP2, putative | HC | chr7:47590926-47596695 | 20130731
Soybean Glyma10g30510.1 213 74.8 81.7  
LJGI gnl|LJGI|TC63288 434 88.6 88.6 weakly similar to UniRef100_A7QVP5 Cluster: Chromosome chr14 scaffold_190, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_190, whole genome shotgun sequence - Vitis vinifera (Grape), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0150479.2 length: 468 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 9.6e-06 29-69
ProfileScan PS50089 ZF_RING_2 11.530 29-70
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.5e-12 10-118
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 45-54
IPR018957 Zinc finger, C3HC4 RING-type
HMMPfam PF00097 zf-C3HC4 6.6e-07 29-69
no_ID  
Coil coil coiled-coil NA 277-355
383-411
HMMPanther PTHR10825 RING 9.9e-32 1-123
HMMPanther PTHR10825:SF3 RING 9.9e-32 1-123
Seg seg seg NA 1-22
309-320
339-350
459-467
superfamily SSF57850 RING/U-box 6.4e-10 22-99
Wolf-PSORT
Lj0g3v0150479.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0150479.2