Miyakogusa Predicted Gene

Lj0g3v0150389.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K3I0_SOYBN 421 55.9 65.8 (tr|K7K3I0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G05660.1 205 39.7 56.2 | Symbols: AtRLP33, RLP33 | receptor like protein 33 | chr3:1649258-1652001 REVERSE LENGTH=875
Medicago Medtr4g017720.1 452 59.1 68.7 | verticillium wilt disease resistance protein | HC | chr4:5570089-5573277 | 20130731
Soybean Glyma03g06810.1 430 61.0 69.9  
LJGI gnl|LJGI|TC76701 1316 99.6 99.6 weakly similar to UniRef100_A7QKY8 Cluster: Chromosome chr8 scaffold_115, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_115, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0150389.1 length: 382 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.88 202-223
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 4.1e-07 224-261
no_ID  
FPrintScan PR00019 LEURICHRPT 6.1e-06 31-44
223-236
Gene3D G3DSA:3.80.10.10 no description 1.6e-54 180-290
HMMPanther PTHR24420 FAMILY 1.1e-69 1-293
HMMPanther PTHR24420:SF480SUBFAMILY NOT 1.1e-69 1-293
HMMPfam PF13855 LRR_8 2.4e-11 31-88
Seg seg seg NA 226-237
247-261
326-337
superfamily SSF52058 L 7.1e-55 6-293
Putative transmembrane regions
  From To
TM segments
SOSUI		 321 342
347 369
Wolf-PSORT
Lj0g3v0150389.1	chlo 5, golg 4, nucl 2, cyto 1, plas 1, E.R. 1, cysk_nucl 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0150389.1