Miyakogusa Predicted Gene

Lj0g3v0149999.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KER5_MEDTR 555 62.4 72.3 (tr|G7KER5) DNA-directed RNA polymerase OS=Medicago truncatula GN=MTR_5g011000 PE=3 SV=1
TAIR_pep AT1G63020.2 306 43.3 60.0 | Symbols: NRPD1A | nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1453
Medicago Medtr5g011000.1 571 68.0 78.6 | DNA-directed RNA polymerase | HC | chr5:3060764-3075383 | 20130731
Soybean Glyma01g42480.1 448 65.9 77.8  
LJGI gnl|LJGI|TC79448 1227 100.0 100.0 similar to UniRef100_A5BZZ3 Cluster: DNA-directed RNA polymerase; n=1; Vitis vinifera|Rep: DNA-directed RNA polymerase - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0149999.3 length: 421 aa.
IPR000722 RNA polymerase, alpha subunit
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPfam PF00623 RNA_pol_Rpb1_2 3.3e-09 330-381
IPR007080 RNA polymerase Rpb1, domain 1
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPfam PF04997 RNA_pol_Rpb1_1 1.1e-06 25-120
no_ID  
HMMPanther PTHR19376 DNA-DIRECTED 1.5e-60 12-421
HMMPanther PTHR19376:SF10 DNA-DIRECTED 1.5e-60 12-421
superfamily SSF64484 beta 1.3e-34 13-421
Wolf-PSORT
Lj0g3v0149999.3	cyto 8, nucl 3, chlo 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0149999.3