Miyakogusa Predicted Gene

Lj0g3v0149979.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K0E1_SOYBN 951 79.3 89.1 (tr|I1K0E1) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G12570.1 741 63.9 75.2 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase family protein | chr1:4278192-4280753 REVERSE LENGTH=572
Medicago Medtr5g011020.1 931 81.1 90.5 | glucose-methanol-choline (GMC) oxidoreductase family protein | HC | chr5:3090658-3094636 | 20130731
Soybean Glyma05g03580.1 951 79.3 89.1  
LJGI gnl|LJGI|GO024042 1162 99.7 99.7 similar to UniRef100_A7QKE2 Cluster: Chromosome chr2 scaffold_112, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_112, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0149979.1 length: 581 aa.
IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00732 GMC_oxred_N 4.6e-31 51-324
PatternScan PS00624 GMC_OXRED_2 NA 283-297
IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF05199 GMC_oxred_C 3.1e-29 420-565
IPR012132 Glucose-methanol-choline oxidoreductase
Biological Process GO:0006066 alcohol metabolic process    
Molecular Function GO:0008812 choline dehydrogenase activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF000137 Alcohol 9.8e-103 1-579
no_ID  
Gene3D G3DSA:3.50.50.60 no description 4.8e-87 515-576
HMMPanther PTHR11552 GLUCOSE-METHANOL-CHOLINE 1.2e-258 1-580
HMMPanther PTHR11552:SF14 SUBFAMILY 1.2e-258 1-580
Seg seg seg NA 7-16
superfamily SSF51905 FAD/NAD(P)-binding 3.4e-49 49-576
superfamily SSF54373 FAD-linked 5.4e-42 319-521
Putative transmembrane regions
  From To
TM segments
SOSUI		 5 27
49 71
Wolf-PSORT
Lj0g3v0149979.1	E.R. 4.5, E.R._plas 3.5, vacu 3, plas 1.5, chlo 1, nucl 1, cyto 1, extr 1, golg 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0149979.1