Miyakogusa Predicted Gene

Lj0g3v0149049.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K2G5_SOYBN 546 81.2 87.2 (tr|K7K2G5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G44980.2 446 68.7 77.9 | Symbols: | SNF2 domain-containing protein / helicase domain-containing protein | chr2:18552343-18556669 REVERSE LENGTH=877
Medicago Medtr7g045505.2 563 83.3 88.7 | Nodule-specific Glycine Rich Peptide | HC | chr7:16014208-16020315 | 20130731
Soybean Glyma01g13950.1 332 79.2 83.5  
LJGI gnl|LJGI|BW616356 224 99.1 99.1 similar to UniRef100_A7PKF4 Cluster: Chromosome chr15 scaffold_19, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_19, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0149049.1 length: 339 aa.
IPR000330 SNF2-related
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00176 SNF2_N 9.3e-55 1-282
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 4.1e-12 1-171
ProfileScan PS51192 HELICASE_ATP_BIND_1 20.248 1-163
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.8e-18 1-208
209-337
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.5e-17 1-160
HMMPanther PTHR10799 SWI/SNF-RELATED 4.8e-201 1-335
HMMPanther PTHR10799:SF111SUBFAMILY NOT 4.8e-201 1-335
Seg seg seg NA 283-294
302-313
Wolf-PSORT
Lj0g3v0149049.1	chlo 5, cyto 2, mito 2, E.R. 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0149049.1