Miyakogusa Predicted Gene

Lj0g3v0147879.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T4S8_LOTJA 135 74.0 74.0 (tr|I3T4S8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G15680.1 106 58.1 61.3 | Symbols: | Ran BP2/NZF zinc finger-like superfamily protein | chr3:5315437-5316048 FORWARD LENGTH=164
Medicago Medtr4g011190.1 120 65.6 67.7 | zinc finger (Ran-binding) family protein | HC | chr4:2646573-2643799 | 20130731
Soybean Glyma08g22470.1 126 72.0 72.0  
LJGI gnl|LJGI|GO025651 563 99.7 99.7 similar to UniRef100_A7P7R9 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0147879.1 length: 96 aa.
IPR001876 Zinc finger, RanBP2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1060.10 no description 1.6e-15 3-30
53-89
HMMPfam PF00641 zf-RanBP 5.2e-06 3-29
58-85
HMMSmart SM00547 Zinc 7e-05 5-29
60-86
PatternScan PS01358 ZF_RANBP2_1 NA 7-26
62-83
ProfileScan PS50199 ZF_RANBP2_2 9.969 3-32
58-89
no_ID  
HMMPanther PTHR23111 ZINC 3.3e-24 1-89
Seg seg seg NA 32-56
superfamily SSF90209 Ran 1.1e-06 48-92
1-35
Wolf-PSORT
Lj0g3v0147879.1	nucl 8.5, cyto_nucl 5, chlo 2, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0147879.1 Not targeted -36.867 -0.604 -5.729 46.04% -30.534