Miyakogusa Predicted Gene
- Lj0g3v0147759.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
| TrEMBL |
I1KXQ4_SOYBN |
303 |
80.2 |
85.6 |
(tr|I1KXQ4) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G69830.1 |
248 |
67.9 |
76.1 |
| Symbols: ATAMY3, AMY3 | alpha-amylase-like 3 | chr1:26288518-26293003 REVERSE LENGTH=887 |
| Medicago |
Medtr8g468990.2 |
268 |
73.5 |
82.7 |
| alpha amylase domain protein | HC | chr8:25017934-25009440 | 20130731 |
| Soybean |
Glyma08g40810.1 |
303 |
80.2 |
85.6 |
|
| LJGI |
gnl|LJGI|FS352630 |
178 |
89.7 |
89.7 |
similar to UniRef100_Q94A41 Cluster: At1g69830/T17F3_14; n=1; Arabidopsis thaliana|Rep: At1g69830/T17F3_14 - Arabidopsis, partial (4%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0147759.1 |
length: 188 aa. |
| IPR006047 |
Glycosyl hydrolase, family 13, catalytic domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Molecular Function |
GO:0043169 |
cation binding |
|
|
| HMMPfam |
PF00128 |
Alpha-amylase |
9.2e-12 |
127-186 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
3.7e-19 |
104-187 |
| IPR015902 |
Glycoside hydrolase, family 13 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| HMMPanther |
PTHR10357 |
ALPHA-AMYLASE |
9.9e-29 |
105-187 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
2.8e-27 |
104-187 |
| no_ID |
|
| HMMPanther |
PTHR10357:SF9 |
ALPHA-AMYLASE |
9.9e-29 |
105-187 |
| Seg |
seg |
seg |
NA |
32-43 |
- Wolf-PSORT
Lj0g3v0147759.1 nucl 5, cyto 3, extr 3, cysk_nucl 3, nucl_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0147759.1 |
|