Miyakogusa Predicted Gene

Lj0g3v0146989.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A2A1E8_LOTJA 336 72.8 72.8 (tr|A2A1E8) Nucleoporin OS=Lotus japonicus GN=NUP85 PE=2 SV=1
TAIR_pep AT4G32910.1 177 42.6 52.6 | Symbols: | CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:15881364-15885210 FORWARD LENGTH=716
Medicago Medtr1g006690.1 255 55.6 62.9 | Nup85 nucleoporin protein | HC | chr1:110219-98846 | 20130731
Soybean Glyma17g27490.1 237 53.0 61.5  
LJGI gnl|LJGI|TC62744 839 100.0 100.0 UniRef100_A2A1E8 Cluster: Nucleoporin; n=1; Lotus japonicus|Rep: Nucleoporin - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0146989.1 length: 197 aa.
IPR011502 Nucleoporin Nup85-like
method AccNumber shortName E-value location
HMMPfam PF07575 Nucleopor_Nup85 3.7e-06 71-140
162-194
no_ID  
HMMPanther PTHR13373 FROUNT 5.5e-56 7-194
HMMPanther PTHR13373:SF15 SUBFAMILY 5.5e-56 7-194
Seg seg seg NA 103-117
Wolf-PSORT
Lj0g3v0146989.1	cyto 10, mito 2, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0146989.1