database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1MHT6_SOYBN | 1873 | 80.2 | 84.1 | (tr|I1MHT6) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
TAIR_pep | AT2G39260.1 | 942 | 65.3 | 76.2 | | Symbols: | binding;RNA binding | chr2:16392288-16399588 REVERSE LENGTH=1181 |
Medicago | Medtr2g048630.1 | 1158 | 82.1 | 86.5 | | regulator of nonsense transcripts-like protein | HC | chr2:21440873-21453740 | 20130731 |
Soybean | Glyma15g22750.1 | 1869 | 80.1 | 83.9 | |
LJGI | gnl|LJGI|TC65464 | 961 | 99.8 | 99.8 | similar to UniRef100_Q2HSQ9 Cluster: Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2; n=1; Medicago truncatula|Rep: Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2 - Medicago truncatula (Barrel medic), partial (13%) |
Lj0g3v0146979.1 | length: 1208 aa. | |||
IPR003890 | MIF4G-like, type 3 | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003677 | DNA binding | ||
Molecular Function | GO:0003723 | RNA binding | ||
Molecular Function | GO:0005515 | protein binding | ||
HMMPfam | PF02854 | MIF4G | 2.5e-37 | 496-680 698-891 |
HMMSmart | SM00543 | Middle | 1e-39 | 62-284 493-681 696-897 |
IPR007193 | Up-frameshift suppressor 2 | |||
HMMPfam | PF04050 | Upf2 | 5.9e-57 | 972-1147 |
IPR016021 | MIF4-like, type 1/2/3 | |||
Biological Process | GO:0016070 | RNA metabolic process | ||
Gene3D | G3DSA:1.25.40.180 | no description | 4.2e-67 | 496-686 990-991 |
IPR016024 | Armadillo-type fold | |||
Molecular Function | GO:0005488 | binding | ||
superfamily | SSF48371 | ARM | 1.3e-08 | 691-916 490-686 80-184 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 17-38 62-90 433-454 564-585 |
HMMPanther | PTHR12839 | NONSENSE-MEDIATED | 0 | 13-1197 |
HMMPanther | PTHR12839:SF7 | SUBFAMILY | 0 | 13-1197 |
Seg | seg | seg | NA | 157-172 438-483 905-916 977-1015 1128-1139 1169-1201 |
Lj0g3v0146979.1 chlo 4, nucl 2.5, chlo_mito 2.5, cyto 2, plas 2, vacu 2, cysk_nucl 2, cyto_plas 2
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj0g3v0146979.1 |