Miyakogusa Predicted Gene

Lj0g3v0146809.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6GT34_VITVI 255 45.2 60.0 (tr|F6GT34) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g06830 PE=4 SV=1
TAIR_pep AT5G61190.1 99.0 32.5 49.5 | Symbols: | putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain | chr5:24615480-24619886 FORWARD LENGTH=995
Medicago Medtr3g023750.1 417 55.8 68.2 | C2H2 type zf-met: zinc-finger protein | HC | chr3:7230508-7224689 | 20130731
Soybean Glyma08g26510.1 114 48.1 62.6  
LJGI gnl|LJGI|TC73905 1146 98.4 98.4 similar to UniRef100_A7PDG1 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0146809.1 length: 388 aa.
IPR003604 Zinc finger, U1-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00451 U1-like 0.0003 118-152
203-237
261-295
347-381
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 9.6 121-145
206-230
264-288
350-372
no_ID  
HMMPanther PTHR23067 DOUBLE-STRANDED 1.2e-16 208-384
HMMPanther PTHR23067:SF21 ZINC 1.2e-16 208-384
HMMPfam PF12874 zf-met 7.7e-08 122-145
207-230
265-288
352-374
superfamily SSF57667 C2H2 0.00011 335-384
191-240
249-298
123-172
Wolf-PSORT
Lj0g3v0146809.1	nucl 12.5, cyto_nucl 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0146809.1