Miyakogusa Predicted Gene

Lj0g3v0146639.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KN73_MEDTR 677 83.6 89.0 (tr|G7KN73) Pectate lyase OS=Medicago truncatula GN=MTR_6g021950 PE=2 SV=1
TAIR_pep AT1G67750.1 589 73.5 81.4 | Symbols: | Pectate lyase family protein | chr1:25401660-25403165 FORWARD LENGTH=408
Medicago Medtr6g021950.1 677 83.6 89.0 | pectate lyase family protein | HC | chr6:7594941-7591413 | 20130731
Soybean Glyma05g23950.1 668 83.4 86.7  
LJGI gnl|LJGI|TC74491 1443 100.0 100.0 similar to UniRef100_Q9M505 Cluster: Pectate lyase; n=1; Vitis vinifera|Rep: Pectate lyase - Vitis vinifera (Grape), partial (62%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0146639.1 length: 398 aa.
IPR002022 Pectate lyase/Amb allergen
method AccNumber shortName E-value location
HMMPfam PF00544 Pec_lyase_C 1.2e-65 131-321
HMMSmart SM00656 no description 1.7e-106 130-327
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 8.5e-111 55-397
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 3.1e-135 56-395
IPR018082 AmbAllergen
FPrintScan PR00807 AMBALLERGEN 4.6e-86 78-95
102-127
138-154
202-223
282-301
304-323
346-370
375-398
no_ID  
HMMPanther PTHR31683 FAMILY 5.8e-214 29-398
HMMPanther PTHR31683:SF0 SUBFAMILY 5.8e-214 29-398
Seg seg seg NA 4-16
358-370
373-385
Wolf-PSORT
Lj0g3v0146639.1	extr 7, vacu 2, chlo 1, cyto 1, mito 1, plas 1, E.R. 1, chlo_mito 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0146639.1