Miyakogusa Predicted Gene

Lj0g3v0146199.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K2H1_SOYBN 405 92.8 94.2 (tr|K7K2H1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G45000.1 378 86.5 92.3 | Symbols: EMB2766 | structural constituent of nuclear pore | chr2:18564156-18567632 FORWARD LENGTH=739
Medicago Medtr7g045280.1 385 92.8 95.7 | structural constituent of nuclear pore protein, putative | HC | chr7:15909312-15903678 | 20130731
Soybean Glyma01g14440.1 335 93.8 94.4  
LJGI gnl|LJGI|TC68810 975 99.4 99.4 similar to UniRef100_A7PKF6 Cluster: Chromosome chr15 scaffold_19, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_19, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0146199.1 length: 619 aa.
IPR007758 Nucleoporin, NSP1-like, C-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005643 nuclear pore    
Molecular Function GO:0017056 structural constituent of nuclear pore    
HMMPfam PF05064 Nsp1_C 5.1e-22 405-511
IPR026010 Nucleoporin NSP1/NUP62
Cellular Component GO:0005643 nuclear pore    
HMMPanther PTHR12084 NUCLEAR 7.7e-63 1-610
no_ID  
Coil coil coiled-coil NA 472-511
524-545
HMMPanther PTHR12084:SF0 SUBFAMILY 7.7e-63 1-610
Seg seg seg NA 2-108
121-138
143-210
212-268
280-365
369-411
Wolf-PSORT
Lj0g3v0146199.1	nucl 7, chlo 4, cyto_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0146199.1