Miyakogusa Predicted Gene

Lj0g3v0145749.4
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KB23_SOYBN 753 73.7 82.8 (tr|K7KB23) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G77360.1 194 26.6 48.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:29071983-29073536 REVERSE LENGTH=517
Medicago Medtr3g008430.2 749 74.9 82.4 | PPR containing plant-like protein | HC | chr3:1537892-1535131 | 20130731
Soybean Glyma02g43940.1 640 76.1 85.8  
LJGI gnl|LJGI|TC58694 58.0 97.0 97.0 homologue to UniRef100_Q9SHF0 Cluster: T19E23.10; n=1; Arabidopsis thaliana|Rep: T19E23.10 - Arabidopsis thaliana (Mouse-ear cress), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0145749.4 length: 491 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.034 250-264
376-405
HMMPfam PF13041 PPR_2 1.4e-08 186-235
301-348
412-454
HMMPfam PF13812 PPR_3 0.3 101-132
269-299
HMMTigr TIGR00756 PPR: 5.7e-08 101-133
190-223
250-268
270-303
305-336
339-370
375-408
411-442
ProfileScan PS51375 PPR 12.321 98-132
187-221
151-186
222-266
267-301
302-336
337-371
373-407
408-442
no_ID  
HMMPanther PTHR24015 FAMILY 1.6e-106 6-477
HMMPanther PTHR24015:SF0 SUBFAMILY 1.6e-106 6-477
Seg seg seg NA 62-75
Wolf-PSORT
Lj0g3v0145749.4	mito 8.5, cyto_mito 5, chlo 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0145749.4