Miyakogusa Predicted Gene
- Lj0g3v0144779.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JL45_MEDTR |
142 |
73.6 |
79.1 |
(tr|G7JL45) Auxin-induced protein 6B OS=Medicago truncatula GN=MTR_4g072500 PE=4 SV=1 |
| TAIR_pep |
AT4G34770.1 |
103 |
69.0 |
78.9 |
| Symbols: | SAUR-like auxin-responsive protein family | chr4:16591352-16591666 FORWARD LENGTH=104 |
| Medicago |
Medtr4g072500.1 |
142 |
73.6 |
79.1 |
| SAUR-like auxin-responsive family protein | HC | chr4:27479145-27478774 | 20130731 |
| Soybean |
Glyma09g35310.1 |
137 |
68.1 |
78.0 |
|
| LJGI |
gnl|LJGI|GO028197 |
268 |
88.4 |
88.4 |
similar to UniRef100_P33083 Cluster: Auxin-induced protein 6B; n=1; Glycine max|Rep: Auxin-induced protein 6B - Glycine max (Soybean), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0144779.1 |
length: 92 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
3.4e-33 |
14-89 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
4.5e-31 |
7-90 |
| Seg |
seg |
seg |
NA |
11-23 |
- Wolf-PSORT
Lj0g3v0144779.1 nucl 4.5, cyto_nucl 4.5, cyto 3.5, chlo 3, mito 3, chlo_mito 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0144779.1 |
|