Miyakogusa Predicted Gene
- Lj0g3v0144589.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JFV2_SOYBN |
1024 |
83.5 |
89.7 |
(tr|I1JFV2) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G11980.1 |
740 |
65.5 |
81.0 |
| Symbols: MS2, FAR2 | Jojoba acyl CoA reductase-related male sterility protein | chr3:3814484-3816927 FORWARD LENGTH=616 |
| Medicago |
Medtr1g054635.1 |
1025 |
82.1 |
89.9 |
| fatty acyl-CoA reductase-like protein | HC | chr1:23771967-23767954 | 20130731 |
| Soybean |
Glyma02g26670.1 |
981 |
87.6 |
93.3 |
|
| LJGI |
gnl|LJGI|TC69503 |
926 |
100.0 |
100.0 |
similar to UniRef100_A6MHV6 Cluster: Male sterility 2; n=1; Brassica rapa subsp. chinensis|Rep: Male sterility 2 - Brassica rapa subsp. chinensis (Pak-choi), partial (24%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0144589.1 |
length: 609 aa. |
| IPR013120 |
Male sterility, NAD-binding |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07993 |
NAD_binding_4 |
8.9e-80 |
125-431 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
4.6e-31 |
343-453 |
| IPR026055 |
Fatty acyl-CoA reductase |
| Molecular Function |
GO:0080019 |
fatty-acyl-CoA reductase (alcohol-forming) activity |
|
|
| HMMPanther |
PTHR11011 |
MALE |
2.6e-249 |
106-602 |
| HMMPfam |
PF03015 |
Sterile |
1.1e-15 |
537-602 |
| no_ID |
|
| HMMPanther |
PTHR11011:SF1 |
MALE |
2.6e-249 |
106-602 |
| Seg |
seg |
seg |
NA |
39-54 |
| superfamily |
SSF51735 |
NAD(P)-binding |
1.6e-31 |
117-450 |
- Wolf-PSORT
Lj0g3v0144589.1 cyto 6, nucl 5, chlo 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0144589.1 |
|