Miyakogusa Predicted Gene

Lj0g3v0142829.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M5S8_SOYBN 1309 76.4 86.1 (tr|I1M5S8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G52620.1 785 48.7 66.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:19603828-19606287 FORWARD LENGTH=819
Medicago Medtr2g103520.1 1169 70.9 80.9 | PPR containing plant-like protein | HC | chr2:44573560-44569817 | 20130731
Soybean Glyma15g01200.1 1314 77.8 86.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0142829.1 length: 822 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0046 166-191
310-339
414-444
HMMPfam PF13041 PPR_2 1.5e-07 236-285
341-390
446-493
516-565
586-634
708-754
HMMPfam PF13812 PPR_3 0.15 129-152
HMMTigr TIGR00756 PPR: 6.1e-08 167-191
240-272
275-308
310-343
344-377
380-406
414-448
450-483
484-517
521-553
554-588
589-623
624-657
ProfileScan PS51375 PPR 6.204 91-125
162-192
126-156
202-236
237-271
272-306
307-341
342-376
377-411
412-446
447-481
482-516
517-551
552-586
587-621
622-656
706-740
741-776
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.7e-05 274-392
445-583
no_ID  
HMMPanther PTHR24015 FAMILY 4.7e-177 93-821
HMMPanther PTHR24015:SF113SUBFAMILY NOT 4.7e-177 93-821
Seg seg seg NA 574-585
superfamily SSF81901 HCP-like 3.4e-12 345-585
Wolf-PSORT
Lj0g3v0142829.1	mito 9, chlo_mito 7.33333, cyto_mito 5.33333, chlo 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0142829.1