| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | Q2HUC1_MEDTR | 336 | 57.4 | 68.0 | (tr|Q2HUC1) Pentatricopeptide repeat OS=Medicago truncatula GN=MTR_2g103550 PE=4 SV=1 |
| TAIR_pep | AT1G80150.1 | 297 | 56.0 | 67.9 | | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:30148738-30149931 FORWARD LENGTH=397 |
| Medicago | Medtr2g103550.2 | 336 | 57.4 | 68.0 | | PPR containing plant-like protein | HC | chr2:44583250-44580161 | 20130731 |
| Soybean | Glyma07g30720.1 | 123 | 31.8 | 50.0 | |
| LJGI | --No_Hits-- |
| Lj0g3v0142799.1 | length: 266 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.53 | 102-124 |
| HMMPfam | PF13041 | PPR_2 | 1.3e-10 | 164-212 |
| HMMTigr | TIGR00756 | PPR: | 1.9e-05 | 202-235 |
| ProfileScan | PS51375 | PPR | 10.852 | 164-199 128-163 200-234 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 3.6e-33 | 26-262 |
| Seg | seg | seg | NA | 81-90 |
Lj0g3v0142799.1 mito 8.5, chlo_mito 7, chlo 4.5
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0142799.1 | Not targeted | -42.701 | -16.536 | -4.643 | 59.52% | -21.522 |