Miyakogusa Predicted Gene

Lj0g3v0141609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3STF0_LOTJA 562 100.0 100.0 (tr|I3STF0) Proteasome subunit beta type OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G40580.2 494 85.6 95.2 | Symbols: PBB2 | 20S proteasome beta subunit PBB2 | chr5:16248511-16250451 REVERSE LENGTH=274
Medicago Medtr7g032930.2 533 94.1 98.2 | proteasome subunit beta type-7-A protein | HC | chr7:11619753-11611396 | 20130731
Soybean Glyma14g01850.5 528 93.8 96.7  
LJGI gnl|LJGI|TC58228 1624 100.0 100.0 homologue to UniRef100_A2Q2I3 Cluster: Proteasome subunit beta type; n=1; Medicago truncatula|Rep: Proteasome subunit beta type - Medicago truncatula (Barrel medic), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0141609.1 length: 272 aa.
IPR000243 Peptidase T1A, proteasome beta-subunit
method AccNumber shortName E-value location
Molecular Function GO:0004175 endopeptidase activity    
Cellular Component GO:0005839 proteasome core complex    
Biological Process GO:0051603 proteolysis involved in cellular protein catabolic process    
FPrintScan PR00141 PROTEASOME 5.2e-09 46-61
166-177
177-188
202-213
IPR001353 Proteasome, subunit alpha/beta
Molecular Function GO:0004298 threonine-type endopeptidase activity    
Cellular Component GO:0005839 proteasome core complex    
Biological Process GO:0051603 proteolysis involved in cellular protein catabolic process    
HMMPfam PF00227 Proteasome 2.6e-46 36-216
IPR016050 Proteasome, beta-type subunit, conserved site
Molecular Function GO:0004175 endopeptidase activity    
Cellular Component GO:0005839 proteasome core complex    
Biological Process GO:0051603 proteolysis involved in cellular protein catabolic process    
PatternScan PS00854 PROTEASOME_B_1 NA 42-89
IPR023333 Proteasome B-type subunit
Molecular Function GO:0004298 threonine-type endopeptidase activity    
ProfileScan PS51476 PROTEASOME_B_2 47.735 38-216
no_ID  
Gene3D G3DSA:3.60.20.10 no description 4.9e-71 39-233
HMMPanther PTHR11599 PROTEASOME 5.8e-125 8-243
HMMPanther PTHR11599:SF1 PROTEASOME 5.8e-125 8-243
superfamily SSF56235 N-terminal 6.1e-63 12-238
Wolf-PSORT
Lj0g3v0141609.1	cyto 12, plas 1, golg 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0141609.1