Miyakogusa Predicted Gene
- Lj0g3v0141589.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KFA2_SOYBN |
251 |
73.6 |
89.0 |
(tr|I1KFA2) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT1G03700.1 |
209 |
61.9 |
79.4 |
| Symbols: | Uncharacterised protein family (UPF0497) | chr1:921038-921844 FORWARD LENGTH=164 |
| Medicago |
Medtr0004s0210.1 |
274 |
80.4 |
90.8 |
| CASP POPTRDRAFT-like protein | HC | scaffold0004:83573-81269 | 20130731 |
| Soybean |
Glyma06g45810.1 |
251 |
73.6 |
89.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0141589.1 |
length: 163 aa. |
| IPR006459 |
Uncharacterised protein family UPF0497, trans-membrane plant subgroup |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMTigr |
TIGR01569 |
A_tha_TIGR01569: |
5.7e-46 |
10-154 |
| IPR006702 |
Uncharacterised protein family UPF0497, trans-membrane plant |
| HMMPfam |
PF04535 |
DUF588 |
2.5e-37 |
5-142 |
| no_ID |
|
| HMMPanther |
PTHR11615 |
NITRATE, |
7.8e-69 |
1-153 |
| HMMPanther |
PTHR11615:SF41 |
INTEGRAL |
7.8e-69 |
1-153 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
7 |
28 |
| 50 |
72 |
| 82 |
104 |
| 138 |
160 |
- Wolf-PSORT
Lj0g3v0141589.1 vacu 9, plas 3, extr 1, E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0141589.1 |
|