Miyakogusa Predicted Gene

Lj0g3v0140559.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JH16_SOYBN 3007 70.0 78.9 (tr|I1JH16) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=2
TAIR_pep AT1G58250.1 2321 55.1 68.7 | Symbols: SAB | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain | chr1:21587317-21601373 REVERSE LENGTH=2607
Medicago Medtr5g066650.1 3042 70.1 78.7 | localization and RNA pol II promoter Fmp27 domain protein | HC | chr5:28137001-28113373 | 20130731
Soybean Glyma02g38000.1 2929 70.0 78.8  
LJGI gnl|LJGI|CB828576 1051 99.8 99.8 similar to UniRef100_A7NUK2 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0140559.2 length: 2170 aa.
IPR019441 FMP27, GFWDK domain
method AccNumber shortName E-value location
HMMPfam PF10347 Fmp27_GFWDK 2.4e-05 1197-1294
IPR019443 FMP27, C-terminal
HMMPfam PF10351 Apt1 5.4e-39 1947-2167
no_ID  
Coil coil coiled-coil NA 697-718
788-812
2092-2113
HMMPanther PTHR15678 ANTIGEN 0 1-2166
HMMPanther PTHR15678:SF6 SUBFAMILY 0 1-2166
Seg seg seg NA 19-34
114-119
261-275
516-527
588-611
871-881
937-952
1023-1034
1392-1411
1790-1804
2005-2017
2018-2040
2054-2063
Putative transmembrane regions
  From To
TM segments
SOSUI		 8 30
Wolf-PSORT
Lj0g3v0140559.2	chlo 8, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0140559.2 Not targeted -23.583 0 -1.179 18.31% -22.404