Miyakogusa Predicted Gene
- Lj0g3v0140259.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3TA27_LOTJA |
621 |
94.2 |
94.5 |
(tr|I3TA27) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G74000.1 |
238 |
43.6 |
58.7 |
| Symbols: SS3 | strictosidine synthase 3 | chr1:27829266-27831401 REVERSE LENGTH=329 |
| Medicago |
Medtr4g112650.1 |
466 |
68.4 |
81.2 |
| SMP-30/gluconolaconase/LRE-like region protein | HC | chr4:45963179-45964874 | 20130731 |
| Soybean |
Glyma17g09110.1 |
410 |
61.4 |
74.1 |
|
| LJGI |
gnl|LJGI|TC76259 |
1915 |
99.5 |
99.5 |
weakly similar to UniRef100_A7PGJ2 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (67%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0140259.1 |
length: 328 aa. |
| IPR011042 |
Six-bladed beta-propeller, TolB-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.120.10.30 |
no description |
3.3e-45 |
29-322 |
| IPR018119 |
Strictosidine synthase, conserved region |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0016844 |
strictosidine synthase activity |
|
|
| HMMPfam |
PF03088 |
Str_synth |
3e-31 |
143-231 |
| no_ID |
|
| HMMPanther |
PTHR10426 |
STRICTOSIDINE |
1.4e-107 |
24-326 |
| HMMPanther |
PTHR10426:SF5 |
STRICTOSIDINE |
1.4e-107 |
24-326 |
| Seg |
seg |
seg |
NA |
16-31 |
| superfamily |
SSF63829 |
Calcium-dependent |
1.4e-40 |
24-321 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
3 |
25 |
- Wolf-PSORT
Lj0g3v0140259.1 vacu 4, chlo 3, extr 3, nucl 1, mito 1, E.R. 1, golg 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0140259.1 |
|