Miyakogusa Predicted Gene
- Lj0g3v0139839.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J4S2_MEDTR |
98.2 |
91.7 |
97.9 |
(tr|G7J4S2) GRAM domain-containing protein 1B OS=Medicago truncatula GN=MTR_3g077000 PE=4 SV=1 |
| TAIR_pep |
AT5G50170.1 |
87.0 |
79.2 |
89.6 |
| Symbols: | C2 calcium/lipid-binding and GRAM domain containing protein | chr5:20421150-20425524 FORWARD LENGTH=1027 |
| Medicago |
Medtr3g077000.1 |
98.2 |
91.7 |
97.9 |
| C2 and GRAM domain plant-like protein | HC | chr3:34574135-34568407 | 20130731 |
| Soybean |
Glyma06g18750.1 |
97.4 |
91.7 |
95.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0139839.1 |
length: 48 aa. |
| IPR000008 |
C2 calcium-dependent membrane targeting |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00168 |
C2 |
2.2e-09 |
2-43 |
| IPR008973 |
C2 calcium/lipid-binding domain, CaLB |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| superfamily |
SSF49562 |
C2 |
5e-09 |
1-44 |
| no_ID |
|
| Gene3D |
G3DSA:2.60.40.150 |
no description |
7.4e-11 |
1-44 |
| HMMPanther |
PTHR16122 |
MCTP-RELATED |
6.8e-17 |
1-48 |
| HMMPanther |
PTHR16122:SF15 |
OS08G0492400 |
6.8e-17 |
1-48 |
- Wolf-PSORT
Lj0g3v0139839.1 chlo 9, nucl 3, extr 1, vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0139839.1 |
|