Miyakogusa Predicted Gene

Lj0g3v0139779.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KUM2_SOYBN 214 56.5 65.5 (tr|I1KUM2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G01610.1 187 61.8 79.9 | Symbols: CDC48C, emb1354 | cell division cycle 48C | chr3:231787-235057 FORWARD LENGTH=820
Medicago Medtr2g007010.1 193 52.8 64.0 | cell division control-like protein | HC | chr2:785713-791640 | 20130731
Soybean Glyma08g19920.1 214 56.5 65.5  
LJGI gnl|LJGI|TC66646 704 99.2 99.2 weakly similar to UniRef100_A7QBR7 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0139779.1 length: 649 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.7 175-294
386-513
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 6.5e-08 179-273
424-468
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9.8e-34 302-610
138-272
no_ID  
Gene3D G3DSA:1.10.8.60 no description 9.7e-09 527-593
Gene3D G3DSA:3.40.50.300 no description 1.2e-26 135-272
424-526
HMMPanther PTHR23077 AAA-FAMILY 6e-107 139-631
HMMPanther PTHR23077:SF16 NUCLEAR 6e-107 139-631
Seg seg seg NA 42-53
109-121
273-285
559-570
Wolf-PSORT
Lj0g3v0139779.1	chlo 4, nucl 4, mito 3.5, cyto_mito 2.5, cyto 2, cysk_nucl 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0139779.1