Miyakogusa Predicted Gene

Lj0g3v0139009.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7LC53_SOYBN 163 46.7 56.6 (tr|K7LC53) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G20480.1 74.7 35.8 51.4 | Symbols: EFR | EF-TU receptor | chr5:6922497-6925679 FORWARD LENGTH=1031
Medicago Medtr6g034470.1 132 44.2 52.4 | receptor-like protein | LC | chr6:11962037-11966729 | 20130731
Soybean Glyma16g28790.1 149 41.5 49.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0139009.1 length: 259 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.011 117-138
142-162
193-213
ProfileScan PS51450 LRR 4.555 12-32
37-58
66-87
92-113
117-139
141-163
193-215
217-239
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 13 10-34
115-139
191-215
no_ID  
FPrintScan PR00019 LEURICHRPT 4.2e-06 13-26
191-204
Gene3D G3DSA:3.80.10.10 no description 2.5e-37 9-253
HMMPanther PTHR24420 FAMILY 1.9e-32 4-250
HMMPfam PF13516 LRR_6 0.64 11-28
Seg seg seg NA 12-36
63-79
214-228
237-248
superfamily SSF52047 RNI-like 3.6e-34 10-254
Wolf-PSORT
Lj0g3v0139009.1	cyto 6.5, cyto_nucl 5, nucl 2.5, mito 1, plas 1, extr 1, pero 1, golg 1, golg_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0139009.1