Miyakogusa Predicted Gene
- Lj0g3v0138979.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MHV1_SOYBN |
130 |
55.4 |
80.2 |
(tr|K7MHV1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G34930.1 |
50.1 |
39.3 |
57.1 |
| Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
| Medicago |
Medtr5g047390.1 |
116 |
53.1 |
74.0 |
| receptor-like protein | LC | chr5:20762158-20758950 | 20130731 |
| Soybean |
Glyma16g28780.1 |
115 |
58.4 |
80.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0138979.1 |
length: 108 aa. |
| IPR013210 |
Leucine-rich repeat-containing N-terminal, type 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08263 |
LRRNT_2 |
5.2e-11 |
42-83 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
4.3e-05 |
39-96 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
6 |
28 |
- Wolf-PSORT
Lj0g3v0138979.1 chlo 5, E.R. 3, nucl 2, mito 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0138979.1 |
|