Miyakogusa Predicted Gene
- Lj0g3v0138589.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L8B5_SOYBN |
121 |
87.7 |
96.9 |
(tr|K7L8B5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G44310.1 |
108 |
76.9 |
89.2 |
| Symbols: | Calcium-binding EF-hand family protein | chr2:18309285-18309713 FORWARD LENGTH=142 |
| Medicago |
Medtr8g446810.1 |
111 |
80.0 |
89.2 |
| calcium-binding EF-hand protein | HC | chr8:18319909-18319217 | 20130731 |
| Soybean |
Glyma15g30610.1 |
120 |
87.7 |
93.8 |
|
| LJGI |
gnl|LJGI|TC64474 |
385 |
100.0 |
100.0 |
similar to UniRef100_A7QR88 Cluster: Chromosome chr13 scaffold_149, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_149, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0138589.1 |
length: 88 aa. |
| IPR002048 |
EF-hand domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005509 |
calcium ion binding |
|
|
| HMMPfam |
PF13202 |
EF_hand_3 |
2.9e-06 |
27-47 |
| ProfileScan |
PS50222 |
EF_HAND_2 |
10.273 |
20-55 |
| IPR011992 |
EF-hand-like domain |
| Molecular Function |
GO:0005509 |
calcium ion binding |
|
|
| Gene3D |
G3DSA:1.10.238.10 |
no description |
0.00016 |
25-54 |
| IPR018247 |
EF-Hand 1, calcium-binding site |
| PatternScan |
PS00018 |
EF_HAND_1 |
NA |
33-45 |
- Wolf-PSORT
Lj0g3v0138589.1 chlo 4, plas 4, vacu 2, E.R. 2, nucl_plas 2, golg_plas 2, E.R._vacu 2, cysk_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0138589.1 |
Not targeted |
-48.862 |
-0.005 |
-5.342 |
72.33% |
-43.515
|