Miyakogusa Predicted Gene
- Lj0g3v0135969.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5XT01_PRUPE |
508 |
48.8 |
71.2 |
(tr|M5XT01) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026277mg PE=4 SV=1 |
| TAIR_pep |
AT4G38180.1 |
327 |
36.8 |
56.8 |
| Symbols: FRS5 | FAR1-related sequence 5 | chr4:17906702-17909404 REVERSE LENGTH=788 |
| Medicago |
Medtr6g051425.1 |
125 |
43.1 |
68.5 |
| FAR1 DNA-binding domain protein | HC | chr6:17965556-17964534 | 20130731 |
| Soybean |
Glyma10g38320.1 |
492 |
44.5 |
70.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0135969.1 |
length: 515 aa. |
| IPR006564 |
Zinc finger, PMZ-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| HMMSmart |
SM00575 |
plant |
2.8e-06 |
375-402 |
| IPR007527 |
Zinc finger, SWIM-type |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| HMMPfam |
PF04434 |
SWIM |
1.1e-05 |
376-400 |
| ProfileScan |
PS50966 |
ZF_SWIM |
9.953 |
364-400 |
| IPR018289 |
MULE transposase domain |
| HMMPfam |
PF10551 |
MULE |
4.3e-28 |
89-179 |
| no_ID |
|
| HMMPanther |
PTHR31669 |
FAMILY |
3.4e-140 |
1-497 |
| HMMPanther |
PTHR31669:SF0 |
SUBFAMILY |
3.4e-140 |
1-497 |
- Wolf-PSORT
Lj0g3v0135969.1 chlo 3, nucl 3, cyto 3, mito 3, cyto_nucl 3, chlo_mito 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0135969.1 |
|