Miyakogusa Predicted Gene

Lj0g3v0134189.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KAB8_MEDTR 1023 73.3 81.5 (tr|G7KAB8) Small glutamine-rich tetratricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_5g063200 PE=4 SV=1
TAIR_pep AT5G65160.1 416 47.5 63.4 | Symbols: TPR14 | tetratricopeptide repeat (TPR)-containing protein | chr5:26031457-26033668 REVERSE LENGTH=593
Medicago Medtr5g063200.1 1023 73.3 81.5 | inactive TPR repeat thioredoxin TTL3-like protein | HC | chr5:26210750-26206440 | 20130731
Soybean Glyma13g01900.1 970 71.4 81.0  
LJGI gnl|LJGI|BP048277 359 89.3 89.3 similar to UniRef100_A7NV01 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0134189.1 length: 702 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 0.0056 306-327
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.2e-28 231-328
381-469
473-587
IPR012336 Thioredoxin-like fold
Gene3D G3DSA:3.40.30.10 no description 2.1e-11 606-698
superfamily SSF52833 Thioredoxin-like 1.1e-12 600-700
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 28.562 237-571
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.022 431-457
IPR013766 Thioredoxin domain
Biological Process GO:0045454 cell redox homeostasis    
HMMPfam PF00085 Thioredoxin 1.2e-07 632-694
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 3.7 237-270
271-304
305-338
424-457
470-503
504-537
538-571
ProfileScan PS50005 TPR 6.667 237-270
271-304
424-457
470-503
504-537
538-571
no_ID  
HMMPanther PTHR23083 TETRATRICOPEPTIDE 9.5e-40 214-574
HMMPfam PF13371 TPR_9 0.073 544-576
HMMPfam PF13414 TPR_11 1.8e-15 236-302
474-531
Seg seg seg NA 2-10
113-123
superfamily SSF48452 TPR-like 4.4e-31 140-587
Putative transmembrane regions
  From To
TM segments
SOSUI		 417 439
Wolf-PSORT
Lj0g3v0134189.1	nucl 4, chlo 3, cyto 3, cysk 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0134189.1