Miyakogusa Predicted Gene
- Lj0g3v0133829.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JPX2_MEDTR |
76.6 |
47.3 |
67.0 |
(tr|G7JPX2) F-box/kelch-repeat protein OS=Medicago truncatula GN=MTR_4g107820 PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr4g107820.1 |
76.3 |
45.3 |
62.3 |
| F-box protein interaction domain protein | HC | chr4:44688868-44687702 | 20130731 |
| Soybean |
Glyma10g36430.1 |
69.3 |
40.0 |
58.0 |
|
| LJGI |
gnl|LJGI|TC80229 |
278 |
88.9 |
88.9 |
similar to UniRef100_A9XI08 Cluster: Class S F-box protein; n=1; Nicotiana alata|Rep: Class S F-box protein - Nicotiana alata (Winged tobacco) (Persian tobacco), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0133829.1 |
length: 129 aa. |
| IPR006527 |
F-box associated domain, type 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07734 |
FBA_1 |
2.1e-08 |
19-116 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
1.3e-11 |
14-116 |
- Wolf-PSORT
Lj0g3v0133829.1 cyto 4, nucl 3, cyto_pero 3, extr 2, pero 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0133829.1 |
|